Fixed terminal long-running processes in app

Improvements

• CorePreserve permission config key order to maintain user-defined permission precedence
• CorePass image parts to custom commands@melihmucuk
• CoreAdd support for jp. prefix in Amazon Bedrock cross-region inference profiles@ikeda-tomoya-swx
• CoreAdd configuration options and authentication precedence for Bedrock@wnkz
• CoreTransform agent improvements and optimizations
• CoreFilter out empty messages and reasoning for Anthropic API compatibility
• TerminalExpand directory on Tab, select on Enter in TUI autocomplete@yuguorui
• TerminalUpdate GitHub Actions examples to use actions/checkout@v6@joshuadavidthomas
• TerminalFix Lucent Orange background transparency for slash commands@roerohan
• TerminalAdd description for MCP command in documentation@cravenceiling
• TerminalAdd system theme resolution and event handling to TUI
• TerminalImprove experience when operations are interrupted
• DesktopStore image attachments in the app
• DesktopFix bottom padding in app interface
• DesktopFixed terminal flakiness issues in the app
• DesktopPerformance improvements through event batching in app
• DesktopFix prompt input covering content in app
• DesktopWorktree selection now correctly navigates to the selected worktree
• DesktopAvoid unintended submits during IME composition@MogamiTsuchikawa
• DesktopHighlight collapsed active project in sidebar@albingroen
• DesktopFix flicker and navigation issues when collapsing or expanding projects in the app@albingroen
• DesktopAdd CLI installation to desktop application@dbpolito
• DesktopFix image dragging in project edit dialog@albingroen